Fibrobacter succinogenes strain HM2

Gram-negativeRodNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Fibrobacterota

Class

Fibrobacteria

Order

Fibrobacterales

Family

Fibrobacteraceae

Genus

Fibrobacter

Description

Fibrobacter succinogenes strain HM2 is a Gram-negative, rod-shaped bacterium that belongs to the domain of anaerobic microorganisms. It is characterized by a single cell arrangement and is non-motile, despite possessing flagella. This strain is classified as mesophilic, indicating its optimal growth occurs within moderate temperature ranges. The primary habitat of F. succinogenes strain HM2 is host-associated, specifically associated with Ovis aries, commonly known as sheep. This bacterium is free-living, suggesting that it can thrive independently within the host's environment. Notably, it has a unique cellular structure featuring two membranes and a single replicon, which is indicative of its genetic organization. Fibrobacter succinogenes plays a crucial role in the digestive processes of its host by contributing to the breakdown of fibrous plant materials. This ecological function is significant in ruminant nutrition, as the efficient degradation of cellulose and hemicellulose by such microorganisms enhances the overall energy availability for the host. Understanding the traits of F. succinogenes strain HM2 can provide insights into its ecological role in the digestive systems of ruminants and its potential implications for agricultural practices involving livestock.

Taxonomy

KingdomPseudomonadati
PhylumFibrobacterota
ClassFibrobacteria
OrderFibrobacterales
FamilyFibrobacteraceae
GenusFibrobacter
SpeciesFibrobacter succinogenes
Strainstrain HM2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Fibrobacter succinogenes strain HM2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Bos, Ovis aries
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fibrobacter succinogenes strain HM2 genome assembly, contig:

Gene Summary

Adenine Count

907894 bp

Thymine Count

892587 bp

Guanine Count

842653 bp

Cytosine Count

867949 bp

Genome Length

3511778 bp

Protein-coding Genes

2865 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine/threonine protein kinaseSAMN05661053_0733Not AvailablePositive867066 - 86811539246.8
membrane protein required for colicin v productionSAMN05661053_0734Not AvailablePositive868128 - 86886226210.8
5-methylthioadenosine/s-adenosylhomocysteine deaminaseSAMN05661053_0735Not AvailableNegative868941 - 87019746892.2
udp-n-acetylmuramate--l-alanine ligaseSAMN05661053_0736Not AvailableNegative870263 - 87169051641.9
23s rrna pseudouridine1911/1915/1917 synthaseSAMN05661053_0737Not AvailableNegative871712 - 87298647608.4
signal peptidase iiSAMN05661053_0738Not AvailableNegative873122 - 87369121761.8
farnesyl-diphosphate farnesyltransferaseSAMN05661053_0739Not AvailableNegative873693 - 87477540385.0
hypothetical proteinSAMN05661053_0740Not AvailableNegative874781 - 87535922686.7
chromosomal replication initiator proteinSAMN05661053_0741Not AvailablePositive875559 - 87688449943.5
diaminopimelate dehydrogenaseSAMN05661053_0742Not AvailableNegative877124 - 87810735728.8

Displaying genes 731 – 740 of 1957 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.