Fibrobacter succinogenes subsp. succinogenes S85

Gram-negativeRodNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Fibrobacterota

Class

Fibrobacteria

Order

Fibrobacterales

Family

Fibrobacteraceae

Genus

Fibrobacter

Description

Fibrobacter succinogenes (strain ATCC 19169 / S85) is an anaerobic, cellulolytic Gram-negative bacterium. It is one of the three most predominant cellulolytic organisms in the rumen. F. succinogenes is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and F. succinogenes has devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose. In addition, the glycocalyx protects against protozoan attack of the bacterium as well as protease attack of the cellulase enzymes. Increasing cellulose degradation is an important goal in industrial processes. (Adaptated from: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=32617). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumFibrobacterota
ClassFibrobacteria
OrderFibrobacterales
FamilyFibrobacteraceae
GenusFibrobacter
SpeciesFibrobacter succinogenes
StrainS85

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Fibrobacter succinogenes subsp. succinogenes S85
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Ovis aries
Cell arrangementSingles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Fibrobacter succinogenes subsp. succinogenes S85, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dnaa atpase domain-containing proteinFSU_RS00005P43742Positive40 - 150354632.1
nad(p)h-binding proteinFSU_RS00010Q5BK63Positive1505 - 237131141.1
hypothetical proteinFSU_RS00015Not AvailablePositive2590 - 395149905.4
nad(+) synthaseFSU_RS00020Q03638Positive4092 - 556753888.8
peptidylprolyl isomeraseFSU_RS00025P0A9L1Positive5757 - 636822041.9
hypothetical proteinFSU_RS00030Not AvailablePositive6497 - 797250133.9
hypothetical proteinFSU_RS00035Not AvailablePositive7989 - 910442231.9
citramalate synthaseFSU_RS00040Q74C76Positive9163 - 1077058910.4
histidinol dehydrogenaseFSU_RS00045Q5KVC6Positive10842 - 1213146361.5
cvpa family proteinFSU_RS00050Not AvailableNegative12251 - 1298226140.9

Displaying genes 1 – 10 of 3178 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.