Fibrobacter succinogenes strain HM2

Gram-negativeRodNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Fibrobacterota

Class

Fibrobacteria

Order

Fibrobacterales

Family

Fibrobacteraceae

Genus

Fibrobacter

Description

Fibrobacter succinogenes strain HM2 is a Gram-negative, rod-shaped bacterium that belongs to the domain of anaerobic microorganisms. It is characterized by a single cell arrangement and is non-motile, despite possessing flagella. This strain is classified as mesophilic, indicating its optimal growth occurs within moderate temperature ranges. The primary habitat of F. succinogenes strain HM2 is host-associated, specifically associated with Ovis aries, commonly known as sheep. This bacterium is free-living, suggesting that it can thrive independently within the host's environment. Notably, it has a unique cellular structure featuring two membranes and a single replicon, which is indicative of its genetic organization. Fibrobacter succinogenes plays a crucial role in the digestive processes of its host by contributing to the breakdown of fibrous plant materials. This ecological function is significant in ruminant nutrition, as the efficient degradation of cellulose and hemicellulose by such microorganisms enhances the overall energy availability for the host. Understanding the traits of F. succinogenes strain HM2 can provide insights into its ecological role in the digestive systems of ruminants and its potential implications for agricultural practices involving livestock.

Taxonomy

KingdomPseudomonadati
PhylumFibrobacterota
ClassFibrobacteria
OrderFibrobacterales
FamilyFibrobacteraceae
GenusFibrobacter
SpeciesFibrobacter succinogenes
Strainstrain HM2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Fibrobacter succinogenes strain HM2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Bos, Ovis aries
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fibrobacter succinogenes strain HM2 genome assembly, contig:

Gene Summary

Adenine Count

907894 bp

Thymine Count

892587 bp

Guanine Count

842653 bp

Cytosine Count

867949 bp

Genome Length

3511778 bp

Protein-coding Genes

2865 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arabinan endo-1,5-alpha-l-arabinosidaseSAMN05661053_0351Not AvailablePositive420713 - 42279475974.3
arabinan endo-1,5-alpha-l-arabinosidaseSAMN05661053_0352Not AvailablePositive422914 - 42481570479.9
hypothetical proteinSAMN05661053_0353Not AvailablePositive424978 - 42651356252.3
hypothetical proteinSAMN05661053_0354Not AvailableNegative426632 - 42700313857.5
protein of unknown functionSAMN05661053_0355Not AvailableNegative427007 - 42757322047.3
glutamine cyclotransferaseSAMN05661053_0356Not AvailablePositive427682 - 42842828117.9
Tmrna,resume consensus sequence (at 91): aataagtgctgacgaaaaNot AvailableNot AvailablePositive428999 - 429356Not Available
hypothetical proteinSAMN05661053_0357Not AvailablePositive429542 - 42995515606.8
uncharacterized proteinSAMN05661053_0358Not AvailableNegative430016 - 43110741746.5
hypothetical proteinSAMN05661053_0359Not AvailableNegative431124 - 43176822302.4

Displaying genes 351 – 360 of 1957 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.