Fibrobacter succinogenes strain HM2

Gram-negativeRodNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Fibrobacterota

Class

Fibrobacteria

Order

Fibrobacterales

Family

Fibrobacteraceae

Genus

Fibrobacter

Description

Fibrobacter succinogenes strain HM2 is a Gram-negative, rod-shaped bacterium that belongs to the domain of anaerobic microorganisms. It is characterized by a single cell arrangement and is non-motile, despite possessing flagella. This strain is classified as mesophilic, indicating its optimal growth occurs within moderate temperature ranges. The primary habitat of F. succinogenes strain HM2 is host-associated, specifically associated with Ovis aries, commonly known as sheep. This bacterium is free-living, suggesting that it can thrive independently within the host's environment. Notably, it has a unique cellular structure featuring two membranes and a single replicon, which is indicative of its genetic organization. Fibrobacter succinogenes plays a crucial role in the digestive processes of its host by contributing to the breakdown of fibrous plant materials. This ecological function is significant in ruminant nutrition, as the efficient degradation of cellulose and hemicellulose by such microorganisms enhances the overall energy availability for the host. Understanding the traits of F. succinogenes strain HM2 can provide insights into its ecological role in the digestive systems of ruminants and its potential implications for agricultural practices involving livestock.

Taxonomy

KingdomPseudomonadati
PhylumFibrobacterota
ClassFibrobacteria
OrderFibrobacterales
FamilyFibrobacteraceae
GenusFibrobacter
SpeciesFibrobacter succinogenes
Strainstrain HM2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Fibrobacter succinogenes strain HM2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Bos, Ovis aries
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fibrobacter succinogenes strain HM2 genome assembly, contig:

Gene Summary

Adenine Count

907894 bp

Thymine Count

892587 bp

Guanine Count

842653 bp

Cytosine Count

867949 bp

Genome Length

3511778 bp

Protein-coding Genes

2865 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aspartate aminotransferaseSAMN05661053_0250Not AvailableNegative305589 - 30677942879.3
predicted exporter protein, rnd superfamilySAMN05661053_0251Not AvailableNegative306763 - 30919591468.6
surface antigenSAMN05661053_0252Not AvailablePositive309228 - 31067654779.5
hypothetical proteinSAMN05661053_0253Not AvailablePositive310835 - 31148222975.9
radical sam enzyme, rsam/lipoprotein systemSAMN05661053_0254Not AvailablePositive311500 - 31257641251.6
uncharacterized conserved protein ybbc, duf1343 familySAMN05661053_0255Not AvailablePositive312602 - 31369941603.2
microcin c transport system permease proteinSAMN05661053_0256Not AvailablePositive313753 - 31483240494.5
peptide/nickel transport system atp-binding proteinSAMN05661053_0257Not AvailablePositive314979 - 31610040542.1
major paralogous domain-containing proteinSAMN05661053_0258Not AvailablePositive316202 - 31714335704.8
nad-dependent deacetylaseSAMN05661053_0259Not AvailableNegative317236 - 31792525867.8

Displaying genes 251 – 260 of 1957 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.