Fibrobacter succinogenes strain HM2

Gram-negativeRodNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Fibrobacterota

Class

Fibrobacteria

Order

Fibrobacterales

Family

Fibrobacteraceae

Genus

Fibrobacter

Description

Fibrobacter succinogenes strain HM2 is a Gram-negative, rod-shaped bacterium that belongs to the domain of anaerobic microorganisms. It is characterized by a single cell arrangement and is non-motile, despite possessing flagella. This strain is classified as mesophilic, indicating its optimal growth occurs within moderate temperature ranges. The primary habitat of F. succinogenes strain HM2 is host-associated, specifically associated with Ovis aries, commonly known as sheep. This bacterium is free-living, suggesting that it can thrive independently within the host's environment. Notably, it has a unique cellular structure featuring two membranes and a single replicon, which is indicative of its genetic organization. Fibrobacter succinogenes plays a crucial role in the digestive processes of its host by contributing to the breakdown of fibrous plant materials. This ecological function is significant in ruminant nutrition, as the efficient degradation of cellulose and hemicellulose by such microorganisms enhances the overall energy availability for the host. Understanding the traits of F. succinogenes strain HM2 can provide insights into its ecological role in the digestive systems of ruminants and its potential implications for agricultural practices involving livestock.

Taxonomy

KingdomPseudomonadati
PhylumFibrobacterota
ClassFibrobacteria
OrderFibrobacterales
FamilyFibrobacteraceae
GenusFibrobacter
SpeciesFibrobacter succinogenes
Strainstrain HM2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Fibrobacter succinogenes strain HM2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Bos, Ovis aries
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fibrobacter succinogenes strain HM2 genome assembly, contig:

Gene Summary

Adenine Count

907894 bp

Thymine Count

892587 bp

Guanine Count

842653 bp

Cytosine Count

867949 bp

Genome Length

3511778 bp

Protein-coding Genes

2865 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
npcbm/new2 domain-containing proteinSAMN05661053_0129Not AvailableNegative148933 - 15149497172.3
transketolaseSAMN05661053_0130Not AvailablePositive151689 - 15376474640.0
transcriptional repressor nrdrSAMN05661053_0131Not AvailablePositive153851 - 15429417171.7
23s rrna (cytosine1962-c5)-methyltransferaseSAMN05661053_0132Not AvailablePositive154483 - 15549636834.0
two-component system, ntrc family, nitrogen regulation response regulator glngSAMN05661053_0133Not AvailableNegative155521 - 15708058330.1
response regulator receiver domain-containing proteinSAMN05661053_0134Not AvailableNegative157089 - 15746313681.5
histidine kinase-, dna gyrase b-, and hsp90-like atpaseSAMN05661053_0135Not AvailableNegative157463 - 15984190652.7
purple acid phosphatase, n-terminal domainSAMN05661053_0136Not AvailableNegative159866 - 165721215698.0
glycosyl hydrolase family 9SAMN05661053_0137Not AvailableNegative165789 - 172178233046.0
hypothetical proteinSAMN05661053_0138Not AvailableNegative172454 - 17315522844.5

Displaying genes 131 – 140 of 1957 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.