Fibrobacter succinogenes strain HM2

Gram-negativeRodNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Fibrobacterota

Class

Fibrobacteria

Order

Fibrobacterales

Family

Fibrobacteraceae

Genus

Fibrobacter

Description

Fibrobacter succinogenes strain HM2 is a Gram-negative, rod-shaped bacterium that belongs to the domain of anaerobic microorganisms. It is characterized by a single cell arrangement and is non-motile, despite possessing flagella. This strain is classified as mesophilic, indicating its optimal growth occurs within moderate temperature ranges. The primary habitat of F. succinogenes strain HM2 is host-associated, specifically associated with Ovis aries, commonly known as sheep. This bacterium is free-living, suggesting that it can thrive independently within the host's environment. Notably, it has a unique cellular structure featuring two membranes and a single replicon, which is indicative of its genetic organization. Fibrobacter succinogenes plays a crucial role in the digestive processes of its host by contributing to the breakdown of fibrous plant materials. This ecological function is significant in ruminant nutrition, as the efficient degradation of cellulose and hemicellulose by such microorganisms enhances the overall energy availability for the host. Understanding the traits of F. succinogenes strain HM2 can provide insights into its ecological role in the digestive systems of ruminants and its potential implications for agricultural practices involving livestock.

Taxonomy

KingdomPseudomonadati
PhylumFibrobacterota
ClassFibrobacteria
OrderFibrobacterales
FamilyFibrobacteraceae
GenusFibrobacter
SpeciesFibrobacter succinogenes
Strainstrain HM2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Fibrobacter succinogenes strain HM2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Bos, Ovis aries
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fibrobacter succinogenes strain HM2 genome assembly, contig:

Gene Summary

Adenine Count

907894 bp

Thymine Count

892587 bp

Guanine Count

842653 bp

Cytosine Count

867949 bp

Genome Length

3511778 bp

Protein-coding Genes

2865 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tigr02147 family proteinSAMN05661053_1345Not AvailablePositive1594176 - 159507234530.8
carboxypeptidase regulatory-like domain-containing proteinSAMN05661053_1346Not AvailablePositive1595069 - 159653853806.8
4fe-4s binding domain-containing proteinSAMN05661053_1347Not AvailablePositive1596678 - 15968726896.74
2,3-di-o-geranylgeranylglyceryl phosphate reductaseSAMN05661053_1348Not AvailablePositive1596862 - 159804943823.6
branched-chain amino acid aminotransferaseSAMN05661053_1349Not AvailableNegative1598247 - 159928138449.2
diguanylate cyclase (ggdef) domain-containing protein/hdig domain-containing proteinSAMN05661053_1350Not AvailablePositive1600131 - 160251589069.9
hypothetical proteinSAMN05661053_1351Not AvailablePositive1602592 - 160323624687.6
citrate synthaseSAMN05661053_1352Not AvailableNegative1603291 - 160458048558.3
aspartate/methionine/tyrosine aminotransferaseSAMN05661053_1353Not AvailableNegative1604612 - 160590747043.5
energy-coupling factor transport system substrate-specific componentSAMN05661053_1354Not AvailableNegative1606085 - 160797169532.6

Displaying genes 1341 – 1350 of 1957 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.