Rhodococcus qingshengii strain S10

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus qingshengii strain S10 is a notable bacterium primarily found in soil habitats. This organism is characterized by the presence of flagella, which are structures that facilitate its motility. The strain is documented under the accession number SSWN00000000.1. With a single replicon, Rhodococcus qingshengii strain S10 exhibits a streamlined genetic organization that may contribute to its adaptability in diverse soil environments. The presence of flagella suggests that this strain is capable of active movement within its habitat, potentially allowing it to colonize various niches and interact with other microorganisms present in the soil ecosystem. The ecological role of Rhodococcus qingshengii strain S10 can be inferred from its soil habitat and motility. Soil-dwelling bacteria like this strain often participate in biogeochemical cycles, contributing to nutrient cycling and organic matter decomposition. Their ability to move can enhance their interactions with plant roots and other soil microbes, facilitating beneficial relationships that promote soil health and fertility. Overall, Rhodococcus qingshengii strain S10 serves as an exemplar of soil microbiota, reflecting the complex interactions and dynamics of microbial life within terrestrial ecosystems. Its motility and genetic characteristics enable it to thrive in the soil, highlighting the importance of such organisms in maintaining ecological balance.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus qingshengii
Strainstrain S10

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus qingshengii strain S10 contig-80000000, whole genome

Gene Summary

Adenine Count

1349010 bp

Thymine Count

1351161 bp

Guanine Count

2238129 bp

Cytosine Count

2243110 bp

Genome Length

7181410 bp

Protein-coding Genes

6395 genes

Non-Coding Genes

243 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
apc family permeaseEU244_32715Not AvailablePositive6906595 - 690858972167.7
class i sam-dependent rna methyltransferaseEU244_32720Not AvailablePositive6908638 - 690990644506.5
winged helix-turn-helix transcriptional regulatorEU244_32725Not AvailablePositive6910061 - 691054917803.2
dha2 family efflux mfs transporter permease subunitEU244_32730Not AvailablePositive6910624 - 691220155580.8
duf541 domain-containing proteinEU244_32735Not AvailableNegative6912253 - 691291823374.4
glutaminase aEU244_32740Not AvailableNegative6912928 - 691475465526.9
1-deoxy-d-xylulose-5-phosphate synthaseEU244_32745Not AvailablePositive6915007 - 691695368296.7
mfs transporterEU244_32750Not AvailableNegative6917042 - 691848450400.5
iron-siderophore abc transporter substrate-binding proteinEU244_32760Not AvailableNegative6918835 - 691985135145.9
tetr/acrr family transcriptional regulatorEU244_32765Not AvailablePositive6919976 - 692052719378.4

Displaying genes 6391 – 6400 of 6638 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.