Rhodococcus qingshengii strain S10

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus qingshengii strain S10 is a notable bacterium primarily found in soil habitats. This organism is characterized by the presence of flagella, which are structures that facilitate its motility. The strain is documented under the accession number SSWN00000000.1. With a single replicon, Rhodococcus qingshengii strain S10 exhibits a streamlined genetic organization that may contribute to its adaptability in diverse soil environments. The presence of flagella suggests that this strain is capable of active movement within its habitat, potentially allowing it to colonize various niches and interact with other microorganisms present in the soil ecosystem. The ecological role of Rhodococcus qingshengii strain S10 can be inferred from its soil habitat and motility. Soil-dwelling bacteria like this strain often participate in biogeochemical cycles, contributing to nutrient cycling and organic matter decomposition. Their ability to move can enhance their interactions with plant roots and other soil microbes, facilitating beneficial relationships that promote soil health and fertility. Overall, Rhodococcus qingshengii strain S10 serves as an exemplar of soil microbiota, reflecting the complex interactions and dynamics of microbial life within terrestrial ecosystems. Its motility and genetic characteristics enable it to thrive in the soil, highlighting the importance of such organisms in maintaining ecological balance.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus qingshengii
Strainstrain S10

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus qingshengii strain S10 contig-80000000, whole genome

Gene Summary

Adenine Count

1349010 bp

Thymine Count

1351161 bp

Guanine Count

2238129 bp

Cytosine Count

2243110 bp

Genome Length

7181410 bp

Protein-coding Genes

6395 genes

Non-Coding Genes

243 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
llm class flavin-dependent oxidoreductaseEU244_28660Not AvailableNegative5984076 - 598475925648.7
sdr family oxidoreductaseEU244_28665Not AvailableNegative5984904 - 598572228321.8
tigr03619 family f420-dependent llm class oxidoreductaseEU244_28670Not AvailableNegative5986588 - 598755334866.1
cbs domain-containing proteinEU244_28675Not AvailableNegative5987810 - 598826216704.1
formate dehydrogenase accessory sulfurtransferase fdhdEU244_28680Not AvailableNegative5988307 - 598915529975.0
fdhf/ydep family oxidoreductaseEU244_28685Not AvailableNegative5989155 - 599147384392.4
lysr family transcriptional regulatorEU244_28690Not AvailableNegative5991554 - 599246833075.5
hypothetical proteinEU244_28695Not AvailableNegative5993127 - 59933909764.17
transposase family proteinEU244_28700Not AvailableNegative5993425 - 599407524158.2
mhs family mfs transporterEU244_28710Not AvailablePositive5994375 - 599543337476.8

Displaying genes 5631 – 5640 of 6638 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.