Rhodococcus qingshengii strain S10

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus qingshengii strain S10 is a notable bacterium primarily found in soil habitats. This organism is characterized by the presence of flagella, which are structures that facilitate its motility. The strain is documented under the accession number SSWN00000000.1. With a single replicon, Rhodococcus qingshengii strain S10 exhibits a streamlined genetic organization that may contribute to its adaptability in diverse soil environments. The presence of flagella suggests that this strain is capable of active movement within its habitat, potentially allowing it to colonize various niches and interact with other microorganisms present in the soil ecosystem. The ecological role of Rhodococcus qingshengii strain S10 can be inferred from its soil habitat and motility. Soil-dwelling bacteria like this strain often participate in biogeochemical cycles, contributing to nutrient cycling and organic matter decomposition. Their ability to move can enhance their interactions with plant roots and other soil microbes, facilitating beneficial relationships that promote soil health and fertility. Overall, Rhodococcus qingshengii strain S10 serves as an exemplar of soil microbiota, reflecting the complex interactions and dynamics of microbial life within terrestrial ecosystems. Its motility and genetic characteristics enable it to thrive in the soil, highlighting the importance of such organisms in maintaining ecological balance.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus qingshengii
Strainstrain S10

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus qingshengii strain S10 contig-80000000, whole genome

Gene Summary

Adenine Count

1349010 bp

Thymine Count

1351161 bp

Guanine Count

2238129 bp

Cytosine Count

2243110 bp

Genome Length

7181410 bp

Protein-coding Genes

6395 genes

Non-Coding Genes

243 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ybdk family carboxylate-amine ligaseEU244_16435Not AvailableNegative3474767 - 347594542562.5
hypothetical proteinEU244_16440Not AvailableNegative3476510 - 347685113128.8
sam-dependent methyltransferaseEU244_16450Not AvailableNegative3478544 - 347943132576.8
rna polymerase subunit sigmaEU244_16455Not AvailablePositive3479816 - 348037019439.4
fumarylacetoacetate hydrolase family proteinEU244_16460Not AvailableNegative3480402 - 348125330476.0
fadr family transcriptional regulatorEU244_16465Not AvailablePositive3481434 - 348207223127.5
duf3500 domain-containing proteinEU244_16470Not AvailablePositive3482084 - 348333147014.7
hypothetical proteinEU244_16475Not AvailablePositive3483328 - 348373515231.9
iclr family transcriptional regulatorEU244_16480Not AvailablePositive3483738 - 348447526447.4
aromatic acid/h+ symport family mfs transporterEU244_16485Not AvailableNegative3484589 - 348582441851.9

Displaying genes 3431 – 3440 of 6638 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.