Herminiimonas fonticola strain DSM 18555

Gram-negativeBacilliaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Herminiimonas

Description

Herminiimonas fonticola strain DSM 18555 is a Gram-negative, aerobic bacterium characterized by its bacilli shape and the presence of flagella. This strain has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. As an aerobic organism, H. fonticola relies on oxygen for its metabolic processes, differentiating it from anaerobic bacteria that thrive in oxygen-deprived conditions. The presence of flagella suggests that this bacterium is motile, allowing it to navigate its environment effectively, which can be advantageous for colonization and nutrient acquisition. The accession number for H. fonticola strain DSM 18555 is SNWF00000000.1, which is crucial for referencing its genomic sequence and related studies in microbial databases. This strain is part of the Herminiimonas genus, which is known for its role in various ecological niches, particularly in freshwater habitats. Understanding the traits of H. fonticola, such as its Gram-negative nature and aerobic lifestyle, provides insights into its ecological roles. Its motility and adaptability might facilitate interactions with other microorganisms and contribute to nutrient cycling in aquatic ecosystems. Overall, the characteristics of Herminiimonas fonticola strain DSM 18555 underscore its potential significance in microbial ecology and its role in maintaining environmental balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusHerminiimonas
SpeciesHerminiimonas fonticola
Strainstrain DSM 18555

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Herminiimonas fonticola strain DSM 18555
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Herminiimonas fonticola strain DSM 18555 Ga0310479_109, whole

Gene Summary

Adenine Count

742666 bp

Thymine Count

765215 bp

Guanine Count

830752 bp

Cytosine Count

776020 bp

Genome Length

3114653 bp

Protein-coding Genes

2945 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative short-subunit dehydrogenase-like oxidoreductase (duf2520 family)EV677_2245Not AvailableNegative2283540 - 228437929884.3
atp-binding cassette subfamily f protein 3EV677_2246Not AvailableNegative2284405 - 228638172982.6
[lsu ribosomal protein l3p]-glutamine n5-methyltransferaseEV677_2247Not AvailableNegative2286594 - 228748432905.4
succinyldiaminopimelate desuccinylaseEV677_2248Not AvailableNegative2287646 - 228877340526.2
arsenate reductaseEV677_2249Not AvailableNegative2288778 - 228913113447.1
twitching motility protein piluEV677_2250Not AvailableNegative2289134 - 229026141240.0
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseEV677_2251Not AvailableNegative2290342 - 229116629546.3
succinyldiaminopimelate aminotransferaseEV677_2252Not AvailableNegative2291252 - 229246644489.2
condensin subunit smcEV677_2253Not AvailablePositive2292705 - 2296247133157.0
ftsz-interacting cell division protein zipaEV677_2254Not AvailablePositive2296585 - 229770340255.4

Displaying genes 2221 – 2230 of 2994 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.