Pseudonocardia endophytica strain DSM 44969

rodaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Pseudonocardia

Description

Pseudonocardia endophytica strain DSM 44969 is a Gram-positive, aerobic bacterium characterized by its rod shape. This strain is mesophilic, with an optimal growth temperature of 25°C, indicating its preference for moderate temperature conditions. Pseudonocardia endophytica is also a spore-forming organism, enabling it to survive in various environmental conditions. The strain is notable for having a single replicon, which may influence its genetic stability and adaptability. The genomic data for Pseudonocardia endophytica can be accessed under the accession number SMFZ00000000.1, providing a basis for further research and characterization of its biological functions and potential applications. Ecologically, the presence of Pseudonocardia endophytica in various environments suggests its role as an endophyte, potentially contributing to plant health and resilience. Endophytic bacteria often engage in symbiotic relationships with plants, promoting growth and providing protection against pathogens. Therefore, the study of Pseudonocardia endophytica may reveal significant insights into plant-microbe interactions and the ecological roles of endophytic bacteria in natural ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusPseudonocardia
SpeciesPseudonocardia endophytica
Strainstrain DSM 44969

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudonocardia endophytica strain DSM 44969 Ga0197528_12, whole

Gene Summary

Adenine Count

1028835 bp

Thymine Count

1032515 bp

Guanine Count

2752266 bp

Cytosine Count

2754378 bp

Genome Length

7567994 bp

Protein-coding Genes

6898 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rsiw-degrading membrane proteinase prsw (m82 family)EV378_5106Not AvailablePositive5410956 - 541175327614.3
cytochrome p450EV378_5107Not AvailablePositive5411988 - 541319043700.8
lysr family transcriptional regulatorEV378_5108Not AvailableNegative5413181 - 541409232643.2
alkanesulfonate monooxygenase ssud/methylene tetrahydromethanopterin reductase-like flavin-dependent oxidoreductase (luciferase family)EV378_5109Not AvailablePositive5414204 - 541532840724.2
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathwayEV378_5110Not AvailablePositive5415325 - 541615829566.6
ornithine cyclodeaminaseEV378_5111Not AvailablePositive5416155 - 541706932084.0
4-hydroxy-tetrahydrodipicolinate synthaseEV378_5112Not AvailablePositive5417066 - 541799833457.8
gentisate 1,2-dioxygenaseEV378_5113Not AvailablePositive5417995 - 541910439869.7
putative glyoxalase superfamily protein phnbEV378_5114Not AvailableNegative5419106 - 541949814105.5
tetr family transcriptional regulatorEV378_5115Not AvailableNegative5419556 - 542069240578.2

Displaying genes 5031 – 5040 of 6969 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.