Pseudonocardia endophytica strain DSM 44969

rodaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Pseudonocardia

Description

Pseudonocardia endophytica strain DSM 44969 is a Gram-positive, aerobic bacterium characterized by its rod shape. This strain is mesophilic, with an optimal growth temperature of 25°C, indicating its preference for moderate temperature conditions. Pseudonocardia endophytica is also a spore-forming organism, enabling it to survive in various environmental conditions. The strain is notable for having a single replicon, which may influence its genetic stability and adaptability. The genomic data for Pseudonocardia endophytica can be accessed under the accession number SMFZ00000000.1, providing a basis for further research and characterization of its biological functions and potential applications. Ecologically, the presence of Pseudonocardia endophytica in various environments suggests its role as an endophyte, potentially contributing to plant health and resilience. Endophytic bacteria often engage in symbiotic relationships with plants, promoting growth and providing protection against pathogens. Therefore, the study of Pseudonocardia endophytica may reveal significant insights into plant-microbe interactions and the ecological roles of endophytic bacteria in natural ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusPseudonocardia
SpeciesPseudonocardia endophytica
Strainstrain DSM 44969

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudonocardia endophytica strain DSM 44969 Ga0197528_12, whole

Gene Summary

Adenine Count

1028835 bp

Thymine Count

1032515 bp

Guanine Count

2752266 bp

Cytosine Count

2754378 bp

Genome Length

7567994 bp

Protein-coding Genes

6898 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
potassium/proton antiporter regulatory subunit (cpa2 family)EV378_2502Not AvailablePositive2751193 - 275167517024.4
potassium/proton antiporter membrane subunit (cpa2 family)EV378_2503Not AvailablePositive2751682 - 275286940446.6
16s rrna (cytidine1402-2'-o)-methyltransferaseEV378_2504Not AvailableNegative2752874 - 275372529844.8
dolichyl-phosphate-mannose-protein mannosyltransferaseEV378_2505Not AvailablePositive2753750 - 275535458872.9
hypothetical proteinEV378_2506Not AvailableNegative2755452 - 27556497484.77
hypothetical proteinEV378_2507Not AvailableNegative2755781 - 275629018822.5
serine phosphatase rsbu (regulator of sigma subunit)EV378_2508Not AvailablePositive2756643 - 275829559458.5
anti-sigma b factor antagonistEV378_2509Not AvailablePositive2758292 - 275863912297.8
phytoene dehydrogenase-like proteinEV378_2510Not AvailablePositive2758647 - 276008950394.1
hypothetical proteinEV378_2511Not AvailablePositive2760086 - 276126742027.0

Displaying genes 2471 – 2480 of 6969 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.