Rhodococcus sp. SMB37

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. SMB37 is a bacterium characterized by the presence of flagella, which suggests potential motility. This trait may facilitate its movement within various environments, influencing its ecological interactions and adaptability. The organism possesses a single replicon, indicating a streamlined genetic structure that may contribute to its efficiency in replication and gene expression. The accession number for Rhodococcus sp. SMB37 is SLVY00000000.1, which provides a reference for genetic and genomic studies related to this strain. Rhodococcus species are known for their diverse metabolic capabilities, often utilizing a variety of carbon sources, which may include complex hydrocarbons. This versatility allows them to thrive in diverse habitats, particularly in soil and contaminated environments. Understanding the traits of Rhodococcus sp. SMB37 can provide insights into its ecological role, particularly in bioremediation processes. Given its motility and metabolic flexibility, this bacterium may play a significant part in the degradation of pollutants, contributing to ecosystem health and recovery in contaminated sites. The study of such bacteria is crucial for developing strategies to harness their capabilities for environmental applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. SMB37
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. SMB37 Ga0310559_152, whole genome shotgun

Gene Summary

Adenine Count

1069363 bp

Thymine Count

1067190 bp

Guanine Count

2036943 bp

Cytosine Count

2051777 bp

Genome Length

6225368 bp

Protein-coding Genes

5791 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized protein duf485EV641_12412Not AvailablePositive5755115 - 575550414179.1
cation/acetate symporterEV641_12413Not AvailablePositive5755501 - 575711755943.0
uncharacterized protein duf664EV641_12414Not AvailableNegative5757157 - 575768719308.8
hypothetical proteinEV641_12415Not AvailableNegative5757749 - 57579316256.04
tspo/mbr related proteinEV641_12416Not AvailableNegative5757966 - 575844517031.4
uncharacterized protein yndb with ahsa1/start domainEV641_12417Not AvailablePositive5758601 - 575905917173.8
helix-turn-helix proteinEV641_12418Not AvailablePositive5759046 - 575938412108.3
glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii)EV641_12419Not AvailablePositive5759429 - 576042436035.7
formate dehydrogenase major subunitEV641_12420Not AvailableNegative5760421 - 576278186238.7
hypothetical proteinEV641_12421Not AvailablePositive5763029 - 576382628997.7

Displaying genes 5451 – 5460 of 5907 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.