Rhodococcus sp. SMB37

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. SMB37 is a bacterium characterized by the presence of flagella, which suggests potential motility. This trait may facilitate its movement within various environments, influencing its ecological interactions and adaptability. The organism possesses a single replicon, indicating a streamlined genetic structure that may contribute to its efficiency in replication and gene expression. The accession number for Rhodococcus sp. SMB37 is SLVY00000000.1, which provides a reference for genetic and genomic studies related to this strain. Rhodococcus species are known for their diverse metabolic capabilities, often utilizing a variety of carbon sources, which may include complex hydrocarbons. This versatility allows them to thrive in diverse habitats, particularly in soil and contaminated environments. Understanding the traits of Rhodococcus sp. SMB37 can provide insights into its ecological role, particularly in bioremediation processes. Given its motility and metabolic flexibility, this bacterium may play a significant part in the degradation of pollutants, contributing to ecosystem health and recovery in contaminated sites. The study of such bacteria is crucial for developing strategies to harness their capabilities for environmental applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. SMB37
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. SMB37 Ga0310559_152, whole genome shotgun

Gene Summary

Adenine Count

1069363 bp

Thymine Count

1067190 bp

Guanine Count

2036943 bp

Cytosine Count

2051777 bp

Genome Length

6225368 bp

Protein-coding Genes

5791 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome d ubiquinol oxidase subunit iEV641_11986Not AvailablePositive5352266 - 535378656261.2
cytochrome d ubiquinol oxidase subunit iiEV641_11987Not AvailablePositive5353796 - 535483337931.7
atp-binding cassette subfamily c protein cyddEV641_11988Not AvailablePositive5354830 - 535654260141.2
atp-binding cassette subfamily c protein cydcEV641_11989Not AvailablePositive5356539 - 535821257107.0
bcct, betaine/carnitine/choline family transporterEV641_11990Not AvailablePositive5358533 - 535891914183.4
choline/carnitine/betaine transportEV641_11991Not AvailablePositive5358959 - 536027847461.1
uncharacterized protein duf1794EV641_11992Not AvailableNegative5360282 - 536094123572.2
uncharacterized protein duf1416EV641_11993Not AvailableNegative5361185 - 536149010251.0
thiosulfate sulfurtransferaseEV641_11994Not AvailableNegative5361495 - 536232830943.9
uncharacterized protein duf4395EV641_11995Not AvailableNegative5362396 - 536285415508.3

Displaying genes 5071 – 5080 of 5907 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.