Rhodococcus sp. SMB37

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. SMB37 is a bacterium characterized by the presence of flagella, which suggests potential motility. This trait may facilitate its movement within various environments, influencing its ecological interactions and adaptability. The organism possesses a single replicon, indicating a streamlined genetic structure that may contribute to its efficiency in replication and gene expression. The accession number for Rhodococcus sp. SMB37 is SLVY00000000.1, which provides a reference for genetic and genomic studies related to this strain. Rhodococcus species are known for their diverse metabolic capabilities, often utilizing a variety of carbon sources, which may include complex hydrocarbons. This versatility allows them to thrive in diverse habitats, particularly in soil and contaminated environments. Understanding the traits of Rhodococcus sp. SMB37 can provide insights into its ecological role, particularly in bioremediation processes. Given its motility and metabolic flexibility, this bacterium may play a significant part in the degradation of pollutants, contributing to ecosystem health and recovery in contaminated sites. The study of such bacteria is crucial for developing strategies to harness their capabilities for environmental applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. SMB37
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. SMB37 Ga0310559_152, whole genome shotgun

Gene Summary

Adenine Count

1069363 bp

Thymine Count

1067190 bp

Guanine Count

2036943 bp

Cytosine Count

2051777 bp

Genome Length

6225368 bp

Protein-coding Genes

5791 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aerobic c4-dicarboxylate transport proteinEV641_11946Not AvailablePositive5309341 - 531071147148.5
tetr family transcriptional regulatorEV641_11947Not AvailableNegative5310796 - 531157829050.0
hypothetical proteinEV641_11948Not AvailableNegative5311770 - 531256430031.3
alkanesulfonate monooxygenase ssud/methylene tetrahydromethanopterin reductase-like flavin-dependent oxidoreductase (luciferase family)EV641_11949Not AvailableNegative5312558 - 531405754476.5
hypothetical proteinEV641_11950Not AvailableNegative5314054 - 53143119107.6
putative hd phosphohydrolaseEV641_11951Not AvailableNegative5314352 - 531497523883.6
mhs family alpha-ketoglutarate permease-like mfs transporterEV641_11952Not AvailableNegative5315033 - 531640048412.0
ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolaseEV641_11953Not AvailablePositive5316868 - 531765929144.5
putative tim-barrel fold metal-dependent hydrolaseEV641_11954Not AvailablePositive5317742 - 531899247027.4
dna-binding fadr family transcriptional regulatorEV641_11955Not AvailableNegative5319032 - 531985029908.7

Displaying genes 5031 – 5040 of 5907 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.