Rhodococcus sp. SMB37

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. SMB37 is a bacterium characterized by the presence of flagella, which suggests potential motility. This trait may facilitate its movement within various environments, influencing its ecological interactions and adaptability. The organism possesses a single replicon, indicating a streamlined genetic structure that may contribute to its efficiency in replication and gene expression. The accession number for Rhodococcus sp. SMB37 is SLVY00000000.1, which provides a reference for genetic and genomic studies related to this strain. Rhodococcus species are known for their diverse metabolic capabilities, often utilizing a variety of carbon sources, which may include complex hydrocarbons. This versatility allows them to thrive in diverse habitats, particularly in soil and contaminated environments. Understanding the traits of Rhodococcus sp. SMB37 can provide insights into its ecological role, particularly in bioremediation processes. Given its motility and metabolic flexibility, this bacterium may play a significant part in the degradation of pollutants, contributing to ecosystem health and recovery in contaminated sites. The study of such bacteria is crucial for developing strategies to harness their capabilities for environmental applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. SMB37
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. SMB37 Ga0310559_152, whole genome shotgun

Gene Summary

Adenine Count

1069363 bp

Thymine Count

1067190 bp

Guanine Count

2036943 bp

Cytosine Count

2051777 bp

Genome Length

6225368 bp

Protein-coding Genes

5791 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative transposase-like dna-binding proteinEV641_11210Not AvailableNegative3988401 - 398873611240.8
had superfamily hydrolase (tigr01509 family)EV641_11211Not AvailableNegative3988681 - 398946027813.7
trehalose/maltose hydrolase-like predicted phosphorylaseEV641_11212Not AvailableNegative3989476 - 399189992711.0
trehalose 6-phosphate phosphataseEV641_11213Not AvailableNegative3991941 - 399275629190.6
iclr-like helix-turn-helix domain-containing proteinEV641_11214Not AvailableNegative3992822 - 399396441661.1
6,7-dimethyl-8-ribityllumazine synthaseEV641_11215Not AvailablePositive3994020 - 399448116999.2
putative mfs family arabinose efflux permeaseEV641_11216Not AvailableNegative3994742 - 399588438265.3
proteasome assembly chaperone (pac2) family proteinEV641_11217Not AvailableNegative3995881 - 399677432652.0
methionine synthase (b12-dependent)EV641_11218Not AvailablePositive3996826 - 4000395129748.0
had superfamily hydrolase (tigr01509 family)EV641_11219Not AvailablePositive4000388 - 400110124906.7

Displaying genes 3831 – 3840 of 5907 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.