Rhodococcus sp. SMB37

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. SMB37 is a bacterium characterized by the presence of flagella, which suggests potential motility. This trait may facilitate its movement within various environments, influencing its ecological interactions and adaptability. The organism possesses a single replicon, indicating a streamlined genetic structure that may contribute to its efficiency in replication and gene expression. The accession number for Rhodococcus sp. SMB37 is SLVY00000000.1, which provides a reference for genetic and genomic studies related to this strain. Rhodococcus species are known for their diverse metabolic capabilities, often utilizing a variety of carbon sources, which may include complex hydrocarbons. This versatility allows them to thrive in diverse habitats, particularly in soil and contaminated environments. Understanding the traits of Rhodococcus sp. SMB37 can provide insights into its ecological role, particularly in bioremediation processes. Given its motility and metabolic flexibility, this bacterium may play a significant part in the degradation of pollutants, contributing to ecosystem health and recovery in contaminated sites. The study of such bacteria is crucial for developing strategies to harness their capabilities for environmental applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. SMB37
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. SMB37 Ga0310559_152, whole genome shotgun

Gene Summary

Adenine Count

1069363 bp

Thymine Count

1067190 bp

Guanine Count

2036943 bp

Cytosine Count

2051777 bp

Genome Length

6225368 bp

Protein-coding Genes

5791 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phnb proteinEV641_111144Not AvailableNegative3893057 - 389351516623.4
hth domain-containing proteinEV641_111145Not AvailablePositive3893644 - 389457634233.1
uncharacterized protein ydei (yjbr/cyay-like superfamily)EV641_111146Not AvailablePositive3894626 - 389519820879.8
tetr family transcriptional regulatorEV641_111147Not AvailableNegative3895235 - 389605029304.5
crotonobetainyl-coa:carnitine coa-transferase caib-like acyl-coa transferaseEV641_111148Not AvailablePositive3896203 - 389741743552.9
nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family)EV641_111149Not AvailablePositive3897482 - 389830628322.8
pyridoxamine 5'-phosphate oxidaseEV641_111150Not AvailablePositive3898336 - 389875515830.7
putative tim-barrel fold metal-dependent hydrolaseEV641_111151Not AvailablePositive3898800 - 390009248561.4
arsr family transcriptional regulatorEV641_111152Not AvailablePositive3900159 - 390056014297.0
acr3 family arsenite transporterEV641_111153Not AvailablePositive3900557 - 390163638913.7

Displaying genes 3751 – 3760 of 5907 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.