Rhodococcus sp. SMB37

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. SMB37 is a bacterium characterized by the presence of flagella, which suggests potential motility. This trait may facilitate its movement within various environments, influencing its ecological interactions and adaptability. The organism possesses a single replicon, indicating a streamlined genetic structure that may contribute to its efficiency in replication and gene expression. The accession number for Rhodococcus sp. SMB37 is SLVY00000000.1, which provides a reference for genetic and genomic studies related to this strain. Rhodococcus species are known for their diverse metabolic capabilities, often utilizing a variety of carbon sources, which may include complex hydrocarbons. This versatility allows them to thrive in diverse habitats, particularly in soil and contaminated environments. Understanding the traits of Rhodococcus sp. SMB37 can provide insights into its ecological role, particularly in bioremediation processes. Given its motility and metabolic flexibility, this bacterium may play a significant part in the degradation of pollutants, contributing to ecosystem health and recovery in contaminated sites. The study of such bacteria is crucial for developing strategies to harness their capabilities for environmental applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. SMB37
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. SMB37 Ga0310559_152, whole genome shotgun

Gene Summary

Adenine Count

1069363 bp

Thymine Count

1067190 bp

Guanine Count

2036943 bp

Cytosine Count

2051777 bp

Genome Length

6225368 bp

Protein-coding Genes

5791 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
selenocysteine lyase/cysteine desulfuraseEV641_11019Not AvailablePositive3547628 - 354893845673.6
luciferase-like monooxygenaseEV641_11020Not AvailablePositive3549140 - 354971819914.5
prolyl-trna editing enzyme ybak/ebsc (cys-trna(pro) deacylase)EV641_11021Not AvailableNegative3549745 - 355021816240.4
enoyl-coa hydrataseEV641_11022Not AvailablePositive3550323 - 355115329127.8
inorganic pyrophosphataseEV641_11023Not AvailableNegative3551262 - 355187322966.0
d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4)EV641_11024Not AvailablePositive3551931 - 355333447038.9
putative hydrolase/coenzyme f420 biosynthesis associated uncharacterized proteinEV641_11025Not AvailablePositive3553331 - 355436236738.3
trna(ile)-lysidine synthaseEV641_11026Not AvailablePositive3554365 - 355539035843.6
hypoxanthine phosphoribosyltransferaseEV641_11027Not AvailablePositive3555411 - 355597120382.5
serine/threonine protein kinaseEV641_11028Not AvailableNegative3555977 - 355800474299.4

Displaying genes 3401 – 3410 of 5907 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.