Rhodococcus sp. SMB37

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. SMB37 is a bacterium characterized by the presence of flagella, which suggests potential motility. This trait may facilitate its movement within various environments, influencing its ecological interactions and adaptability. The organism possesses a single replicon, indicating a streamlined genetic structure that may contribute to its efficiency in replication and gene expression. The accession number for Rhodococcus sp. SMB37 is SLVY00000000.1, which provides a reference for genetic and genomic studies related to this strain. Rhodococcus species are known for their diverse metabolic capabilities, often utilizing a variety of carbon sources, which may include complex hydrocarbons. This versatility allows them to thrive in diverse habitats, particularly in soil and contaminated environments. Understanding the traits of Rhodococcus sp. SMB37 can provide insights into its ecological role, particularly in bioremediation processes. Given its motility and metabolic flexibility, this bacterium may play a significant part in the degradation of pollutants, contributing to ecosystem health and recovery in contaminated sites. The study of such bacteria is crucial for developing strategies to harness their capabilities for environmental applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. SMB37
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. SMB37 Ga0310559_152, whole genome shotgun

Gene Summary

Adenine Count

1069363 bp

Thymine Count

1067190 bp

Guanine Count

2036943 bp

Cytosine Count

2051777 bp

Genome Length

6225368 bp

Protein-coding Genes

5791 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent clp protease atp-binding subunit clpcEV641_107208Not AvailableNegative3016574 - 301900087720.0
atp-dependent rna helicase helyEV641_107209Not AvailablePositive3019131 - 302143183078.6
nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family)EV641_107210Not AvailableNegative3021446 - 302233632356.6
putative integral membrane protein (tigr00698 family)EV641_107211Not AvailableNegative3022398 - 302344734766.8
putative abc transport system atp-binding proteinEV641_107212Not AvailableNegative3023522 - 302420523459.2
putative abc transport system permease proteinEV641_107213Not AvailableNegative3024202 - 302525735697.0
signal transduction histidine kinaseEV641_107214Not AvailablePositive3025455 - 302664841603.4
dna-binding narl/fixj family response regulatorEV641_107215Not AvailablePositive3026645 - 302728022110.6
dna-directed rna polymerase specialized sigma24 family proteinEV641_107216Not AvailablePositive3027356 - 302851040242.4
is605 orfb family transposaseEV641_107217Not AvailablePositive3028518 - 302957940089.9

Displaying genes 2951 – 2960 of 5907 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.