Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_04885 | Not Available | Negative | 1170224 - 1170973 | 29564.6 |
| duf4302 domain-containing protein | EZ449_04890 | Not Available | Negative | 1171615 - 1172961 | 50455.8 |
| hypothetical protein | EZ449_04895 | Not Available | Negative | 1172979 - 1174334 | 51660.9 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_04900 | Not Available | Negative | 1174426 - 1175886 | 54804.9 |
| susc/raga family tonb-linked outer membrane protein | EZ449_04905 | Not Available | Negative | 1175896 - 1179513 | 133354.0 |
| fecr family protein | EZ449_04910 | Not Available | Negative | 1179844 - 1181007 | 43846.1 |
| rna polymerase sigma-70 factor | EZ449_04915 | Not Available | Negative | 1181058 - 1181666 | 23299.2 |
| hypothetical protein | EZ449_04920 | Not Available | Negative | 1182246 - 1183484 | 46267.4 |
| peptidase s8 | EZ449_04925 | Not Available | Negative | 1183493 - 1185142 | 59631.4 |
| tlpa family protein disulfide reductase | EZ449_04930 | Not Available | Negative | 1185172 - 1186305 | 43801.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

