Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_04835 | Not Available | Negative | 1160565 - 1161005 | 16672.8 |
| hypothetical protein | EZ449_04840 | Not Available | Negative | 1161002 - 1164439 | 133667.0 |
| xre family transcriptional regulator | EZ449_04845 | Not Available | Negative | 1164644 - 1165054 | 15678.7 |
| hepn domain-containing protein | EZ449_04850 | Not Available | Positive | 1165363 - 1166058 | 27035.0 |
| hypothetical protein | EZ449_04855 | Not Available | Positive | 1166120 - 1166605 | 18889.4 |
| hypothetical protein | EZ449_04860 | Not Available | Positive | 1166574 - 1167344 | 30720.1 |
| hypothetical protein | EZ449_04865 | Not Available | Negative | 1167478 - 1168080 | 22896.6 |
| mobilization protein | EZ449_04870 | Not Available | Negative | 1168102 - 1169046 | 35850.9 |
| plasmid mobilization relaxosome protein mobc | EZ449_04875 | Not Available | Negative | 1169043 - 1169402 | 13575.9 |
| dna-binding protein | EZ449_04880 | Not Available | Negative | 1169842 - 1170120 | 10571.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

