Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| neuraminidase | EZ449_04785 | Not Available | Negative | 1149400 - 1150686 | 48219.5 |
| hypothetical protein | EZ449_04790 | Not Available | Negative | 1150812 - 1151453 | 24282.9 |
| transcriptional regulator | EZ449_04795 | Not Available | Negative | 1151699 - 1152055 | 13366.5 |
| duf1304 family protein | EZ449_04800 | Not Available | Positive | 1152202 - 1152633 | 16209.4 |
| crp/fnr family transcriptional regulator | EZ449_04805 | Not Available | Positive | 1152661 - 1153248 | 22551.8 |
| hypothetical protein | EZ449_04810 | Not Available | Positive | 1153349 - 1154029 | 25383.1 |
| tetratricopeptide repeat protein | EZ449_04815 | Not Available | Negative | 1154179 - 1155351 | 44322.1 |
| hypothetical protein | EZ449_04820 | Not Available | Negative | 1155802 - 1156503 | 27803.8 |
| sam-dependent dna methyltransferase | EZ449_04825 | Not Available | Negative | 1156507 - 1158867 | 91088.5 |
| response regulator | EZ449_04830 | Not Available | Negative | 1159338 - 1160564 | 46376.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

