Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transporter exbd | EZ449_04730 | Not Available | Negative | 1132594 - 1133121 | 19450.5 |
| superoxide dismutase family protein | EZ449_04735 | Not Available | Negative | 1133222 - 1133755 | 18918.2 |
| hypothetical protein | EZ449_04740 | Not Available | Positive | 1133874 - 1134218 | 13088.4 |
| dmt family transporter | EZ449_04745 | Not Available | Positive | 1134337 - 1135191 | 29806.2 |
| pas domain s-box protein | EZ449_04755 | Not Available | Positive | 1135854 - 1138325 | 93559.2 |
| glycoside hydrolase family 2 | EZ449_04760 | Not Available | Negative | 1138371 - 1141139 | 104785.0 |
| duf4981 domain-containing protein | EZ449_04765 | Not Available | Negative | 1141267 - 1144464 | 120332.0 |
| duf2264 domain-containing protein | EZ449_04770 | Not Available | Negative | 1144848 - 1146059 | 46077.1 |
| glycoside hydrolase family 88 protein | EZ449_04775 | Not Available | Negative | 1146098 - 1147237 | 43796.2 |
| beta-xylosidase | EZ449_04780 | Not Available | Negative | 1147239 - 1149395 | 80498.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

