Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate abc transporter substrate-binding protein | EZ449_04680 | Not Available | Negative | 1123201 - 1124109 | 34123.5 |
| hypothetical protein | EZ449_04685 | Not Available | Negative | 1124118 - 1124336 | 8506.98 |
| energy transducer tonb | EZ449_04690 | Not Available | Negative | 1124343 - 1125161 | 30244.4 |
| biopolymer transporter exbd | EZ449_04695 | Not Available | Negative | 1125180 - 1125686 | 18382.5 |
| biopolymer transporter exbd | EZ449_04700 | Not Available | Negative | 1125690 - 1126304 | 22554.5 |
| mota/tolq/exbb proton channel family protein | EZ449_04705 | Not Available | Negative | 1126384 - 1127217 | 29123.6 |
| phosphoenolpyruvate carboxykinase (atp) | EZ449_04710 | Not Available | Negative | 1127515 - 1129110 | 59404.0 |
| translation initiation factor | EZ449_04715 | Not Available | Negative | 1129758 - 1130108 | 12728.5 |
| diacylglycerol kinase family lipid kinase | EZ449_04720 | Not Available | Negative | 1130154 - 1131056 | 32912.1 |
| methionine adenosyltransferase | EZ449_04725 | Not Available | Positive | 1131262 - 1132512 | 45817.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

