Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4159 domain-containing protein | EZ449_04580 | Not Available | Negative | 1103892 - 1104476 | 22186.4 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | EZ449_04585 | Not Available | Negative | 1104599 - 1105303 | 26561.1 |
| hlyc/corc family transporter | EZ449_04590 | Not Available | Negative | 1105312 - 1106739 | 52951.7 |
| inorganic diphosphatase | EZ449_04595 | Not Available | Negative | 1106739 - 1107290 | 20852.1 |
| deda family protein | EZ449_04600 | Not Available | Negative | 1107294 - 1107959 | 25082.2 |
| nadh-quinone oxidoreductase subunit n | EZ449_04605 | Not Available | Negative | 1108007 - 1109380 | 49889.5 |
| nadh-quinone oxidoreductase subunit m | EZ449_04610 | Not Available | Negative | 1109384 - 1110847 | 53719.5 |
| nadh-quinone oxidoreductase subunit l | EZ449_04615 | Not Available | Negative | 1110868 - 1112760 | 69349.1 |
| nadh-quinone oxidoreductase subunit nuok | EZ449_04620 | Not Available | Negative | 1112780 - 1113109 | 12071.2 |
| nadh-quinone oxidoreductase subunit j | EZ449_04625 | Not Available | Negative | 1113109 - 1113612 | 18308.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

