Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_04525 | Not Available | Positive | 1089308 - 1090495 | 46014.2 |
| feob-associated cys-rich membrane protein | EZ449_04530 | Not Available | Positive | 1090625 - 1090783 | 5681.15 |
| crp/fnr family transcriptional regulator | EZ449_04535 | Not Available | Positive | 1090795 - 1091382 | 22743.7 |
| polyisoprenoid-binding protein | EZ449_04540 | Not Available | Positive | 1091542 - 1092072 | 19222.4 |
| pirin family protein | EZ449_04545 | Not Available | Positive | 1092140 - 1093009 | 32359.6 |
| glycosyltransferase | EZ449_04550 | Not Available | Positive | 1093172 - 1096576 | 128800.0 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | EZ449_04555 | Not Available | Negative | 1096863 - 1097342 | 17337.0 |
| type ix secretion system outer membrane channel protein porv | EZ449_04560 | Not Available | Negative | 1097389 - 1098579 | 42571.2 |
| gliding motility lipoprotein gldj | EZ449_04570 | Not Available | Positive | 1101663 - 1103321 | 61207.1 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | EZ449_04575 | Not Available | Negative | 1103389 - 1103889 | 18685.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

