Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | EZ449_04425 | Not Available | Positive | 1065369 - 1066283 | 35020.9 |
| alpha-l-fucosidase | EZ449_04430 | Not Available | Positive | 1066326 - 1067774 | 54127.0 |
| methyltransferase domain-containing protein | EZ449_04435 | Not Available | Negative | 1067742 - 1068524 | 29908.2 |
| peptidase s41 | EZ449_04440 | Not Available | Negative | 1068685 - 1071870 | 119932.0 |
| glycosyltransferase | EZ449_04445 | Not Available | Positive | 1071955 - 1073226 | 47853.4 |
| duf1016 family protein | EZ449_04450 | Not Available | Positive | 1073234 - 1074325 | 42186.0 |
| glycosyltransferase | EZ449_04455 | Not Available | Positive | 1074327 - 1075073 | 28793.3 |
| hypothetical protein | EZ449_04460 | Not Available | Positive | 1075077 - 1075769 | 27046.5 |
| type 1 glutamine amidotransferase | EZ449_04465 | Not Available | Positive | 1075841 - 1076401 | 20330.9 |
| hypothetical protein | EZ449_04470 | Not Available | Negative | 1076467 - 1077510 | 40977.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

