Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s dicluster domain-containing protein | EZ449_00330 | Not Available | Negative | 97457 - 100489 | 111200.0 |
| c-type cytochrome | EZ449_00335 | Not Available | Negative | 100538 - 101836 | 48004.4 |
| deoxyhypusine synthase | EZ449_00340 | Not Available | Negative | 102091 - 103071 | 36913.2 |
| polymerase | EZ449_00345 | Not Available | Positive | 103372 - 104502 | 43038.1 |
| tonb-dependent receptor | EZ449_00350 | Not Available | Negative | 104599 - 106980 | 90322.6 |
| hypothetical protein | EZ449_00355 | Not Available | Negative | 106995 - 109193 | 82455.3 |
| n-acetylmuramoyl-l-alanine amidase | EZ449_00360 | Not Available | Negative | 109206 - 110765 | 58542.3 |
| blai/meci/copy family transcriptional regulator | EZ449_00365 | Not Available | Negative | 110762 - 111130 | 14309.1 |
| duf1801 domain-containing protein | EZ449_00370 | Not Available | Negative | 111624 - 112049 | 15978.4 |
| duf4365 domain-containing protein | EZ449_00375 | Not Available | Negative | 112199 - 114004 | 69829.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

