Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_04375 | Not Available | Positive | 1057302 - 1057814 | 19238.4 |
| hypothetical protein | EZ449_04380 | Not Available | Positive | 1057951 - 1059219 | 48509.6 |
| uracil phosphoribosyltransferase | EZ449_04385 | Not Available | Positive | 1059295 - 1059948 | 24127.4 |
| protein tyrosine phosphatase | EZ449_04390 | Not Available | Positive | 1060015 - 1060332 | 12382.8 |
| noncanonical pyrimidine nucleotidase, yjjg family | EZ449_04395 | Not Available | Positive | 1060381 - 1061082 | 27155.2 |
| dinb family protein | EZ449_04400 | Not Available | Positive | 1061107 - 1061625 | 19827.0 |
| hypothetical protein | EZ449_04405 | Not Available | Positive | 1061665 - 1062357 | 23962.8 |
| flippase | EZ449_04410 | Not Available | Positive | 1062390 - 1063718 | 49876.6 |
| fkbm family methyltransferase | EZ449_04415 | Not Available | Positive | 1063715 - 1064362 | 24232.1 |
| class i sam-dependent methyltransferase | EZ449_04420 | Not Available | Positive | 1064380 - 1065141 | 29550.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

