Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphate thymidylyltransferase | EZ449_04225 | Not Available | Negative | 1024082 - 1024942 | 31301.9 |
| dtdp-4-dehydrorhamnose reductase | EZ449_04230 | Not Available | Negative | 1024999 - 1025859 | 31307.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | EZ449_04235 | Not Available | Negative | 1025852 - 1026400 | 20476.3 |
| dtdp-glucose 4,6-dehydratase | EZ449_04240 | Not Available | Negative | 1026400 - 1027452 | 39916.4 |
| hypothetical protein | EZ449_04245 | Not Available | Negative | 1028659 - 1029462 | 30565.1 |
| hypothetical protein | EZ449_04250 | Not Available | Negative | 1029605 - 1029877 | 10689.0 |
| duf3109 family protein | EZ449_04255 | Not Available | Negative | 1030346 - 1030915 | 21613.9 |
| duf3108 domain-containing protein | EZ449_04260 | Not Available | Negative | 1030918 - 1031691 | 29471.7 |
| duf2480 family protein | EZ449_04265 | Not Available | Negative | 1032107 - 1032625 | 19450.5 |
| peptidylprolyl isomerase | EZ449_04270 | Not Available | Negative | 1032688 - 1034775 | 75200.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

