Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4038 domain-containing protein | EZ449_04025 | Not Available | Positive | 961301 - 962701 | 53429.1 |
| arabinosidase | EZ449_04030 | Not Available | Positive | 963099 - 964025 | 35311.4 |
| six-hairpin glycosidase | EZ449_04035 | Not Available | Positive | 964130 - 965962 | 68960.8 |
| sialate o-acetylesterase | EZ449_04040 | Not Available | Positive | 966063 - 967400 | 50196.0 |
| glycoside hydrolase family 2 | EZ449_04045 | Not Available | Positive | 967484 - 970294 | 107023.0 |
| alpha-rhamnosidase | EZ449_04050 | Not Available | Positive | 970587 - 973304 | 103289.0 |
| duf3826 domain-containing protein | EZ449_04055 | Not Available | Positive | 973527 - 974192 | 24853.1 |
| sialidase | EZ449_04060 | Not Available | Positive | 974359 - 975486 | 41379.6 |
| acetylxylan esterase | EZ449_04065 | Not Available | Positive | 975483 - 976994 | 57095.5 |
| sugar phosphate isomerase/epimerase | EZ449_04070 | Not Available | Positive | 976998 - 977891 | 33545.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

