Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome oxidase subunit iii | EZ449_00280 | Not Available | Negative | 87005 - 87712 | 26817.1 |
| heme-copper oxidase subunit iii | EZ449_00285 | Not Available | Negative | 87744 - 88310 | 21091.4 |
| protoheme ix farnesyltransferase | EZ449_00290 | Not Available | Negative | 88326 - 89234 | 33776.4 |
| heme a synthase | EZ449_00295 | Not Available | Negative | 89247 - 90305 | 39629.6 |
| cytochrome c oxidase subunit i | EZ449_00300 | Not Available | Negative | 90387 - 92174 | 66662.6 |
| cytochrome c oxidase subunit ii | EZ449_00305 | Not Available | Negative | 92291 - 93520 | 46002.2 |
| quinol:cytochrome c oxidoreductase | EZ449_00310 | Not Available | Negative | 93591 - 94814 | 46404.0 |
| cytochrome c | EZ449_00315 | Not Available | Negative | 94830 - 95447 | 22176.4 |
| duf3341 domain-containing protein | EZ449_00320 | Not Available | Negative | 95419 - 95955 | 19823.2 |
| hydrogenase | EZ449_00325 | Not Available | Negative | 95958 - 97430 | 55715.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

