Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l35 | EZ449_03875 | Not Available | Positive | 917029 - 917229 | 7257.16 |
| 50s ribosomal protein l20 | EZ449_03880 | Not Available | Positive | 917307 - 917651 | 12983.0 |
| replicative dna helicase | EZ449_03885 | Not Available | Negative | 917753 - 919315 | 57991.4 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | EZ449_03890 | Not Available | Positive | 919514 - 920284 | 27979.2 |
| hypothetical protein | EZ449_03895 | Not Available | Positive | 920349 - 921098 | 27938.2 |
| mannose-1-phosphate guanylyltransferase | EZ449_03900 | Not Available | Negative | 921095 - 922186 | 41035.2 |
| kpsf/gutq family sugar-phosphate isomerase | EZ449_03905 | Not Available | Negative | 922201 - 923169 | 34536.0 |
| dna helicase recq | EZ449_03910 | Not Available | Positive | 923261 - 925450 | 82332.8 |
| 3-deoxy-8-phosphooctulonate synthase | EZ449_03915 | Not Available | Positive | 925550 - 926362 | 29279.5 |
| duf2071 domain-containing protein | EZ449_03920 | Not Available | Positive | 926365 - 927081 | 28104.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

