Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated c-terminal domain-containing protein | EZ449_03825 | Not Available | Negative | 899444 - 902128 | 101129.0 |
| hypothetical protein | EZ449_03830 | Not Available | Negative | 902182 - 902898 | 27822.0 |
| radical sam protein | EZ449_03835 | Not Available | Positive | 903211 - 905406 | 83528.1 |
| amidohydrolase | EZ449_03840 | Not Available | Negative | 905547 - 908774 | 119146.0 |
| recq family atp-dependent dna helicase | EZ449_03845 | Not Available | Positive | 908847 - 910739 | 72133.3 |
| mfs transporter | EZ449_03850 | Not Available | Positive | 910833 - 912140 | 48402.4 |
| (fe-s)-binding protein | EZ449_03855 | Not Available | Positive | 912162 - 912899 | 27445.7 |
| hypothetical protein | EZ449_03860 | Not Available | Positive | 913175 - 914074 | 32342.9 |
| threonine--trna ligase | EZ449_03865 | Not Available | Positive | 914488 - 916413 | 73056.3 |
| translation initiation factor if-3 | EZ449_03870 | Not Available | Positive | 916430 - 916999 | 21426.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

