Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_00230 | Not Available | Negative | 75136 - 75408 | 10093.8 |
| duf4302 domain-containing protein | EZ449_00235 | Not Available | Negative | 75518 - 76864 | 47927.2 |
| hypothetical protein | EZ449_00240 | Not Available | Negative | 76868 - 78259 | 51428.6 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_00245 | Not Available | Negative | 78274 - 79746 | 55014.9 |
| susc/raga family tonb-linked outer membrane protein | EZ449_00250 | Not Available | Negative | 79759 - 83400 | 135710.0 |
| duf4974 domain-containing protein | EZ449_00255 | Not Available | Negative | 83444 - 84409 | 36181.6 |
| rna polymerase sigma-70 factor | EZ449_00260 | Not Available | Negative | 84521 - 85123 | 23317.4 |
| duf420 domain-containing protein | EZ449_00265 | Not Available | Negative | 85229 - 85771 | 20359.0 |
| redoxin domain-containing protein | EZ449_00270 | Not Available | Negative | 85931 - 86626 | 26468.4 |
| caa(3)-type oxidase | EZ449_00275 | Not Available | Negative | 86626 - 86979 | 13374.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

