Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_03315 | Not Available | Positive | 762356 - 763318 | 37636.1 |
| dienelactone hydrolase family protein | EZ449_03320 | Not Available | Negative | 763319 - 764182 | 31536.0 |
| redoxin domain-containing protein | EZ449_03325 | Not Available | Negative | 764294 - 765073 | 29514.9 |
| 2og-fe(ii) oxygenase | EZ449_03330 | Not Available | Positive | 765151 - 765741 | 22834.0 |
| polyketide cyclase | EZ449_03335 | Not Available | Negative | 765933 - 766358 | 16068.7 |
| response regulator | EZ449_03340 | Not Available | Positive | 766620 - 766982 | 13227.0 |
| pas domain s-box protein | EZ449_03345 | Not Available | Positive | 767109 - 768722 | 60392.8 |
| pas domain s-box protein | EZ449_03350 | Not Available | Negative | 768732 - 771356 | 98892.9 |
| twin-arginine translocase tata/tate family subunit | EZ449_03355 | Not Available | Positive | 771548 - 771739 | 6734.54 |
| hypothetical protein | EZ449_03360 | Not Available | Positive | 771961 - 772215 | 9847.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

