Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate-binding protein | EZ449_03215 | Not Available | Positive | 743737 - 745149 | 53722.4 |
| efflux rnd transporter periplasmic adaptor subunit | EZ449_03220 | Not Available | Positive | 745606 - 746688 | 40408.6 |
| efflux rnd transporter permease subunit | EZ449_03225 | Not Available | Positive | 746713 - 749883 | 115557.0 |
| tolc family protein | EZ449_03230 | Not Available | Positive | 749876 - 751309 | 53020.2 |
| hypothetical protein | EZ449_03235 | Not Available | Positive | 751465 - 751674 | 8074.64 |
| helix-turn-helix domain-containing protein | EZ449_03240 | Not Available | Negative | 752054 - 753016 | 35706.5 |
| dinb family protein | EZ449_03245 | Not Available | Positive | 753158 - 753652 | 18579.3 |
| dinb family protein | EZ449_03250 | Not Available | Positive | 753656 - 754156 | 18940.9 |
| hypothetical protein | EZ449_03255 | Not Available | Positive | 754171 - 754587 | 15859.7 |
| duf1801 domain-containing protein | EZ449_03260 | Not Available | Positive | 754615 - 755010 | 15404.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

