Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf72 domain-containing protein | EZ449_03165 | Not Available | Positive | 732516 - 733277 | 28643.1 |
| ferritin-like domain-containing protein | EZ449_03170 | Not Available | Positive | 733476 - 734030 | 20034.8 |
| catalase | EZ449_03175 | Not Available | Positive | 734041 - 736233 | 81271.6 |
| hypothetical protein | EZ449_03180 | Not Available | Positive | 736292 - 736900 | 22594.8 |
| ankyrin repeat domain-containing protein | EZ449_03185 | Not Available | Negative | 736878 - 737384 | 18042.1 |
| pas domain s-box protein | EZ449_03190 | Not Available | Negative | 737490 - 739457 | 73863.1 |
| arac family transcriptional regulator | EZ449_03195 | Not Available | Negative | 739614 - 740510 | 34329.3 |
| nuclear transport factor 2 family protein | EZ449_03200 | Not Available | Positive | 740724 - 741095 | 14603.8 |
| aldo/keto reductase | EZ449_03205 | Not Available | Positive | 741107 - 742090 | 35608.7 |
| aldo/keto reductase | EZ449_03210 | Not Available | Positive | 742169 - 743296 | 41456.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

