Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylanthranilate isomerase | EZ449_02960 | Not Available | Positive | 683898 - 684533 | 23582.1 |
| tryptophan synthase subunit beta | EZ449_02965 | Not Available | Positive | 684841 - 686025 | 43321.9 |
| tryptophan synthase subunit alpha | EZ449_02970 | Not Available | Positive | 686100 - 686867 | 28295.0 |
| hypothetical protein | EZ449_02975 | Not Available | Positive | 686935 - 687336 | 15081.8 |
| tetr/acrr family transcriptional regulator | EZ449_02985 | Not Available | Positive | 688746 - 689351 | 23151.0 |
| efflux rnd transporter periplasmic adaptor subunit | EZ449_02990 | Not Available | Positive | 689424 - 690623 | 42878.5 |
| efflux rnd transporter permease subunit | EZ449_02995 | Not Available | Positive | 690852 - 694049 | 115956.0 |
| tolc family protein | EZ449_03000 | Not Available | Positive | 694036 - 695442 | 50802.5 |
| signal peptide peptidase sppa | EZ449_03005 | Not Available | Negative | 695613 - 697379 | 64900.1 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | EZ449_03010 | Not Available | Positive | 697432 - 697926 | 18433.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

