Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_02850 | Not Available | Negative | 663804 - 664877 | 40733.8 |
| hypothetical protein | EZ449_02855 | Not Available | Positive | 665252 - 665446 | 6393.16 |
| tetratricopeptide repeat-containing sensor histidine kinase | EZ449_02860 | Not Available | Positive | 665707 - 667299 | 60977.3 |
| response regulator | EZ449_02865 | Not Available | Positive | 667311 - 667976 | 25299.4 |
| Trna-leu | Not Available | Not Available | Positive | 669453 - 669536 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 669604 - 669679 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 670108 - 670191 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 670260 - 670335 | Not Available |
| recx family transcriptional regulator | EZ449_02900 | Not Available | Negative | 670428 - 670916 | 18730.7 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | EZ449_02905 | Not Available | Positive | 670978 - 673437 | 91829.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

