Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | EZ449_02800 | Not Available | Negative | 650097 - 653132 | 112509.0 |
| efflux rnd transporter periplasmic adaptor subunit | EZ449_02805 | Not Available | Negative | 653137 - 654192 | 38955.2 |
| hypothetical protein | EZ449_02810 | Not Available | Negative | 654237 - 654641 | 14824.4 |
| hypothetical protein | EZ449_02815 | Not Available | Negative | 654974 - 655963 | 38380.8 |
| hypothetical protein | EZ449_02820 | Not Available | Negative | 656245 - 656490 | 8691.47 |
| hypothetical protein | EZ449_02825 | Not Available | Negative | 656513 - 656722 | 7321.99 |
| efflux rnd transporter permease subunit | EZ449_02830 | Not Available | Negative | 656811 - 659921 | 116931.0 |
| xre family transcriptional regulator | EZ449_02835 | Not Available | Negative | 659934 - 660164 | 8947.89 |
| response regulator transcription factor | EZ449_02840 | Not Available | Positive | 660422 - 661147 | 27721.7 |
| histidine kinase | EZ449_02845 | Not Available | Positive | 661388 - 662500 | 43586.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

