Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyttr family transcriptional regulator | EZ449_02750 | Not Available | Positive | 641289 - 642149 | 33596.1 |
| hypothetical protein | EZ449_02755 | Not Available | Positive | 642246 - 642797 | 19769.5 |
| hypothetical protein | EZ449_02760 | Not Available | Positive | 642866 - 643384 | 18274.2 |
| molybdopterin-guanine dinucleotide biosynthesis protein mobb | EZ449_02765 | Not Available | Negative | 643581 - 644555 | 37278.3 |
| hypothetical protein | EZ449_02770 | Not Available | Negative | 644558 - 645142 | 22462.5 |
| hypothetical protein | EZ449_02775 | Not Available | Negative | 645536 - 645844 | 11684.0 |
| dna-binding protein | EZ449_02780 | Not Available | Negative | 645828 - 646145 | 11940.7 |
| hypothetical protein | EZ449_02785 | Not Available | Negative | 646292 - 647047 | 29356.0 |
| tlpa family protein disulfide reductase | EZ449_02790 | Not Available | Positive | 647272 - 648666 | 53091.9 |
| tolc family protein | EZ449_02795 | Not Available | Negative | 648682 - 650100 | 53467.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

