Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | EZ449_02700 | Not Available | Negative | 629955 - 630776 | 31673.9 |
| hypothetical protein | EZ449_02705 | Not Available | Negative | 630821 - 631120 | 11179.5 |
| atp-binding cassette domain-containing protein | EZ449_02710 | Not Available | Negative | 631352 - 632548 | 45161.0 |
| xre family transcriptional regulator | EZ449_02715 | Not Available | Negative | 632987 - 633529 | 21062.4 |
| susc/raga family tonb-linked outer membrane protein | EZ449_02720 | Not Available | Positive | 633966 - 637028 | 111526.0 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_02725 | Not Available | Positive | 637031 - 638476 | 53310.9 |
| duf3738 domain-containing protein | EZ449_02730 | Not Available | Positive | 638466 - 639785 | 50862.9 |
| hypothetical protein | EZ449_02735 | Not Available | Negative | 639810 - 640169 | 13097.2 |
| hypothetical protein | EZ449_02740 | Not Available | Negative | 640277 - 640513 | 8998.45 |
| hypothetical protein | EZ449_02745 | Not Available | Negative | 640769 - 641125 | 13977.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

