Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4143 domain-containing protein | EZ449_02650 | Not Available | Positive | 619955 - 621304 | 51269.2 |
| metallophosphoesterase | EZ449_02655 | Not Available | Negative | 621497 - 622261 | 29874.2 |
| s8 family peptidase | EZ449_02660 | Not Available | Positive | 623197 - 625401 | 82002.9 |
| imma/irre family metallo-endopeptidase | EZ449_02665 | Not Available | Negative | 625407 - 626288 | 33668.2 |
| xre family transcriptional regulator | EZ449_02670 | Not Available | Negative | 626285 - 626638 | 13379.1 |
| hypothetical protein | EZ449_02675 | Not Available | Positive | 626824 - 627516 | 26390.6 |
| thif family adenylyltransferase | EZ449_02680 | Not Available | Positive | 627491 - 628672 | 43765.0 |
| hypothetical protein | EZ449_02685 | Not Available | Positive | 628653 - 629090 | 17265.5 |
| duf2188 domain-containing protein | EZ449_02690 | Not Available | Positive | 629242 - 629463 | 8088.49 |
| hypothetical protein | EZ449_02695 | Not Available | Positive | 629541 - 629921 | 14553.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

