Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 28 protein | EZ449_02600 | Not Available | Negative | 608733 - 610406 | 60836.3 |
| pectin esterase | EZ449_02605 | Not Available | Negative | 610566 - 611522 | 35647.9 |
| hypothetical protein | EZ449_02610 | Not Available | Negative | 611813 - 612157 | 13465.5 |
| oxidoreductase | EZ449_02615 | Not Available | Positive | 612296 - 613321 | 38250.6 |
| zinc-dependent peptidase | EZ449_02620 | Not Available | Positive | 613428 - 614201 | 29307.2 |
| hypothetical protein | EZ449_02625 | Not Available | Positive | 614270 - 615169 | 33116.5 |
| prc-barrel domain containing protein | EZ449_02630 | Not Available | Positive | 615309 - 615896 | 22347.1 |
| hypothetical protein | EZ449_02635 | Not Available | Positive | 616129 - 616374 | 9022.66 |
| 2-methylisocitrate lyase | EZ449_02640 | Not Available | Negative | 616536 - 617870 | 49652.6 |
| paraquat-inducible protein a | EZ449_02645 | Not Available | Negative | 617888 - 619159 | 47403.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

