Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_02500 | Not Available | Negative | 577757 - 579961 | 83612.4 |
| lyttr family transcriptional regulator | EZ449_02505 | Not Available | Negative | 580082 - 580681 | 22428.7 |
| response regulator transcription factor | EZ449_02510 | Not Available | Negative | 581010 - 581753 | 27905.1 |
| sensor histidine kinase | EZ449_02515 | Not Available | Negative | 581755 - 583362 | 60824.4 |
| class i sam-dependent rrna methyltransferase | EZ449_02520 | Not Available | Negative | 583657 - 584841 | 44167.9 |
| laci family transcriptional regulator | EZ449_02525 | Not Available | Negative | 585425 - 586459 | 38674.6 |
| tonb-dependent receptor | EZ449_02530 | Not Available | Positive | 586726 - 589956 | 118303.0 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_02535 | Not Available | Positive | 589974 - 591809 | 67352.4 |
| duf4957 domain-containing protein | EZ449_02540 | Not Available | Positive | 591828 - 593474 | 57241.7 |
| pectin esterase | EZ449_02545 | Not Available | Positive | 593556 - 594578 | 38008.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

