Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnogalacturonan acetylesterase | EZ449_02450 | Not Available | Negative | 566032 - 566823 | 30128.5 |
| glycosyl hydrolase 43 family protein | EZ449_02455 | Not Available | Negative | 566949 - 568580 | 60727.9 |
| ompa family protein | EZ449_02460 | Not Available | Negative | 568707 - 569390 | 23336.1 |
| abc transporter atp-binding protein | EZ449_02465 | Not Available | Negative | 569559 - 570251 | 25938.1 |
| hypothetical protein | EZ449_02470 | Not Available | Negative | 570254 - 571726 | 56373.3 |
| replication-associated recombination protein a | EZ449_02475 | Not Available | Negative | 571784 - 573064 | 46990.5 |
| voc family protein | EZ449_02480 | Not Available | Positive | 573192 - 573572 | 14172.1 |
| mfs transporter | EZ449_02485 | Not Available | Negative | 573906 - 575213 | 48069.2 |
| class i sam-dependent methyltransferase | EZ449_02490 | Not Available | Positive | 575388 - 576119 | 28239.5 |
| histidine--trna ligase | EZ449_02495 | Not Available | Negative | 576237 - 577628 | 51663.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

