Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | EZ449_02400 | Not Available | Negative | 551102 - 552505 | 54782.8 |
| m1 family peptidase | EZ449_02405 | Not Available | Negative | 553153 - 555663 | 93719.6 |
| aldehyde dehydrogenase family protein | EZ449_02410 | Not Available | Positive | 555787 - 557328 | 54830.5 |
| 3-ketoacyl-acp reductase | EZ449_02415 | Not Available | Positive | 557414 - 558130 | 25416.8 |
| hypothetical protein | EZ449_02420 | Not Available | Negative | 558202 - 558843 | 22744.8 |
| duf4153 domain-containing protein | EZ449_02425 | Not Available | Negative | 559087 - 560901 | 68997.7 |
| tonb-dependent receptor | EZ449_02430 | Not Available | Positive | 561048 - 563843 | 104304.0 |
| glpgli family protein | EZ449_02435 | Not Available | Positive | 563849 - 564631 | 29593.4 |
| crp/fnr family transcriptional regulator | EZ449_02440 | Not Available | Positive | 564682 - 565251 | 22815.6 |
| carboxymuconolactone decarboxylase family protein | EZ449_02445 | Not Available | Positive | 565542 - 565976 | 16342.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

