Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate kinase | EZ449_02350 | Not Available | Positive | 540844 - 542328 | 54484.1 |
| xylose isomerase | EZ449_02355 | Not Available | Positive | 542406 - 543737 | 49965.3 |
| sodium transporter | EZ449_02360 | Not Available | Positive | 543946 - 545622 | 60590.5 |
| voc family protein | EZ449_02365 | Not Available | Positive | 545793 - 546167 | 13817.4 |
| hypothetical protein | EZ449_02370 | Not Available | Negative | 546172 - 546555 | 14159.9 |
| ftsx-like permease family protein | EZ449_02375 | Not Available | Negative | 546557 - 547750 | 43753.6 |
| mbl fold metallo-hydrolase | EZ449_02380 | Not Available | Negative | 547874 - 548512 | 23635.0 |
| gliding motility lipoprotein gldd | EZ449_02385 | Not Available | Negative | 548577 - 549164 | 23013.4 |
| shikimate dehydrogenase | EZ449_02390 | Not Available | Negative | 549413 - 550156 | 27566.2 |
| phosphosulfolactate synthase | EZ449_02395 | Not Available | Negative | 550274 - 551041 | 28702.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

