Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | EZ449_02295 | Not Available | Negative | 534053 - 534586 | 20384.3 |
| dna-3-methyladenine glycosylase i | EZ449_02300 | Not Available | Negative | 534586 - 535176 | 22577.1 |
| mgmt family protein | EZ449_02310 | Not Available | Negative | 535627 - 535959 | 12513.2 |
| trna (guanosine(46)-n7)-methyltransferase trmb | EZ449_02315 | Not Available | Negative | 535956 - 536606 | 24918.5 |
| hydrogen peroxide-inducible genes activator | EZ449_02320 | Not Available | Positive | 536811 - 537743 | 35081.1 |
| hypothetical protein | EZ449_02325 | Not Available | Negative | 537864 - 538094 | 8677.8 |
| hypothetical protein | EZ449_02330 | Not Available | Negative | 538235 - 538696 | 17453.0 |
| superoxide dismutase | EZ449_02335 | Not Available | Negative | 538794 - 539402 | 22468.5 |
| nucleoside deaminase | EZ449_02340 | Not Available | Negative | 539509 - 539976 | 17471.1 |
| pp_00466 | EZ449_02345 | Not Available | Negative | 540262 - 540597 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

